Metadata-Version: 1.2
Name: PythonCyc
Version: 2.0.2
Summary: A Python interface to Pathway Tools, 2019 update
Home-page: https://github.com/networkbiolab/PythonCyc
Author: Rodrigo Santibáñez
Author-email: glucksfall@users.noreply.github.com
License: SRI International
Project-URL: Manual, https://pythoncyc-v20.readthedocs.io
Project-URL: Bug Reports, https://github.com/networkbiolab/PythonCyc/issues
Project-URL: Source, https://github.com/networkbiolab/PythonCyc
Description: Copyright (c) 2014, SRI International
        
        Permission is hereby granted, free of charge, to any person obtaining
        a copy of this software and associated documentation files (the
        "Software"), to deal in the Software without restriction, including
        without limitation the rights to use, copy, modify, merge, publish,
        distribute, sublicense, and/or sell copies of the Software, and to
        permit persons to whom the Software is furnished to do so, subject to
        the following conditions:
        
        The above copyright notice and this permission notice shall be
        included in all copies or substantial portions of the Software.
        
        THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
        EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
        MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
        NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE
        LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION
        OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION
        WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
        
        PythonCyc 2.0, January 2020
        ===========================
        
        Overview
        --------
        
        An updated version of the original PythonCyc API from Mario Latendresse.
        
        This module has been tested under Python 3.6 and Python 3.8, with examples
        at https://github.com/networkbiolab/PythonCyc/tree/master/examples
        
        Disclaimer: a number of functions remains broken.
        
        
        PythonCyc 1.0, November 2014
        ============================
        
        Overview
        --------
        
        The PythonCyc module provides a Python interface to a Pathway Tools
        application running either locally or remotely. This module has been
        designed to work on the three platforms supported by Pathway Tools:
        Linux, Mac OS X, and Windows. Pathway Tools version 18.5 or
        above is needed to use this module.
        
        This module has been tested under Python 2.6 and 2.7, IPython 2.1 and
        IPython notebook.
        
        Installation
        ------------
        
        Please, consult the HTML file tutorial.html under the doc directory of this
        package for the installation instruction of PythonCyc and how to start
        Pathway Tools to be able to use PythonCyc.
        
        Documentation
        -------------
        
        1) For a tutorial on how to use PythonCyc, please consult the HTML file
        tutorial.html under the doc directory of this package, or go directly
        to the tutorial by clicking the following link https://github.com/latendre/PythonCyc/blob/master/doc/tutorial.md
        
        2) For the API documentation of PythonCyc, please consult http://pythoncyc.readthedocs.org.
        
        3) For the latest news about PythonCyc, please consult
        http://bioinformatics.ai.sri.com/ptools/pythoncyc.html
        
        Author
        ------
        
        Mario Latendresse, latendre@AI.SRI.COM
        
        License
        -------
        
        See file LICENSE.
        
        Support
        -------
        
        For comments and/or bug reports, send an email to ptools-support@ai.sri.com.
        
        Acknowledgments
        ---------------
        
        Thanks to Eli Bogart to have inspired some implementation details of
        PythonCyc via PyCyc, Tomer Altman for the Pathway Tools API
        documentation, and Daniel Weaver for suggesting to implement some
        specific functions and his design, with Kai Chen, of the beautiful PythonCyc logo.
        
Platform: UNKNOWN
Requires-Python: ~=3.0
